Last updated: 2022-01-18

Checks: 2 0

Knit directory: Barley1kGBS_Proj/

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Rmd f2ad354 Che-Wei Chang 2022-01-18 wflow_publish("analysis/data_links.Rmd")
html 5e688f9 Che-Wei Chang 2022-01-18 Build site.
Rmd 9934ce1 Che-Wei Chang 2022-01-18 update website
html 9934ce1 Che-Wei Chang 2022-01-18 update website
html b38dcf2 Che-Wei Chang 2022-01-18 Build site.
Rmd 3357e07 Che-Wei Chang 2022-01-18 add links to datasets
html 3357e07 Che-Wei Chang 2022-01-18 add links to datasets

Genotpyic data

  • unimputed 58,616 SNPs of 244 B1K+ accessions (vcf.gz)
  • unimputed and LD-pruned 19,601 SNPs of 244 B1K+ accessions (vcf.gz)
  • imputed 27,147 SNPs (MAF>0.05) of 244 B1K+ accessions (vcf.gz)
  • 4,793 geographically diverse SNPs of IPK accessions and B1K+ accessions (vcf.gz)

Ancestry coefficients

  • Ancestry coefficients estimated with K=4 using ALStructure (RDS)

Geographical coordinates

  • Geographical coordinates of 244 B1K+ accessions (tsv)

Environmental data

  • Raw data (tsv)
  • 12 Env variables used in GEA analyses (tsv)